Don't be surprised if the chain needs modified. In effect, shorter shocks change more than just your swing arm to main cradle angle. My 250 Scrambler is running 2" longer Ceriani racing shocks, chain had 5 links added to it by a previous owner. Which was about 2 too many... My Savage bar hopper has 800 Intruder shocks, had to adjust the belt tension after the shock swap. Wife's 800 Intruder runs the original shocks off my Savage, but the drive shaft compensated for it automatically.
Shock length changes the arc the swing arm travels in. Don't know how to explain it, I'm neither a physicist or an engineer.